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IDSCO6539 TypeCDS
From1433929 nt length819
To1434747 aa length272
Gene pI5.83
Definitionhypothetical protein M.W (Da)30305
NoteSC5C7.24c AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1860 putative DNA-binding protein3924.0e-110
sgrSGR_1133 putative DNA-binding protein3662.0e-102
samSAM23877_6244 hypothetical protein4713.0e-171
scabSCAB17071 putative DNA-binding protein4109.0e-116
saceSACE_7094 transcriptional regulator, XRE family2162.0e-57
nfarnfa22820 putative DNA-binding protein2001.0e-52

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain17-7749.53.6e-13

HTH_31Helix-turn-helix20-7340.32.2e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011030996.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 13840.0e+00
WP_136208578.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13830.0e+00
WP_121710324.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 13810.0e+00
WP_189283515.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 13800.0e+00
WP_003972440.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 13770.0e+00
WP_109028522.1 helix-turn-helix transcriptional regulator [Streptomyces rub... 13700.0e+00
WP_164279480.1 helix-turn-helix transcriptional regulator [Streptomyces rub... 13640.0e+00
EOY51592.1 Transcriptional regulator, Cro/CI family [Streptomyces lividans 1... 13550.0e+00
WP_076977356.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 13480.0e+00
WP_059300268.1 helix-turn-helix transcriptional regulator [Streptomyces can... 13420.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear