-- | --

IDSCO6645 TypeCDS
From1286996 nt length1806
To1285191 aa length601
Gene pI11.75
Definitionputative transport system permease protein M.W (Da)61217
NoteSC4G2.19 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
sgrSGR_4016 putative ABC transporter permease protein3958.0e-111
samSAM23877_6299 putative transport system permease protein7510.0e+00
scabSCAB8731 putative ABC transporter permease protein5953.0e-171
saceSACE_2668 putative transport system permease protein2782.0e-75

*sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_12Binding-protein-dependent transport system inner membrane component118-300, 399-56699.02.4e-28

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_193485697.1 ABC transporter permease subunit [Streptomyces anthocyanicus... 15440.0e+00
WP_038534236.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 15400.0e+00
WP_011031071.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 15400.0e+00
WP_037666085.1 ABC transporter permease subunit [Streptomyces lividans] 15360.0e+00
WP_136208408.1 ABC transporter permease subunit [Streptomyces sp. LRa12] >l... 15350.0e+00
WP_093457408.1 MULTISPECIES: ABC transporter permease subunit [unclassified... 15350.0e+00
WP_210984511.1 ABC transporter permease subunit [Streptomyces sp. RK76] >lc... 15340.0e+00
WP_106518071.1 ABC transporter permease subunit [Streptomyces sp. 111WW2] >... 15300.0e+00
WP_030871784.1 ABC transporter permease subunit [Streptomyces violaceoruber... 15290.0e+00
WP_189283546.1 ABC transporter permease subunit [Streptomyces anthocyanicus... 15160.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear