-- | --

IDSCO6709 TypeCDS
From1206924 nt length1026
To1205899 aa length341
Gene pI6.36
Definitionhypothetical protein M.W (Da)38531
NoteSC4C6.19 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Categorysimilar to unknown proteins

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1696 hypothetical protein5392.0e-154
sgrSGR_1023 conserved hypothetical protein5184.0e-148
samSAM23877_6362 hypothetical protein6650.0e+00
scabSCAB13581 hypothetical protein5783.0e-166
saceSACE_1849 possible DNA ligase (ATP)3723.0e-104
nfarnfa13650 hypothetical protein3031.0e-83

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_primase_S1DNA primase small subunit135-25640.72.4e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972287.1 MULTISPECIES: non-homologous end-joining DNA ligase [Strepto... 17810.0e+00
WP_030869657.1 non-homologous end-joining DNA ligase [Streptomyces violaceo... 17750.0e+00
WP_121714097.1 non-homologous end-joining DNA ligase [Streptomyces sp. E5N9... 17740.0e+00
WP_087805740.1 non-homologous end-joining DNA ligase [Streptomyces sp. CS11... 17670.0e+00
WP_153176876.1 non-homologous end-joining DNA ligase [Streptomyces sp. SYP-... 17640.0e+00
MYS77486.1 ATP-dependent DNA ligase [Streptomyces sp. SID5926] 17610.0e+00
WP_164277712.1 non-homologous end-joining DNA ligase [Streptomyces rubrogri... 17600.0e+00
GGL74132.1 ATP-dependent DNA ligase [Streptomyces anthocyanicus] >dbj 17590.0e+00
WP_226025915.1 non-homologous end-joining DNA ligase [Streptomyces hyderaba... 17580.0e+00
WP_161377854.1 MULTISPECIES: non-homologous end-joining DNA ligase [unclass... 17570.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear