-- | --

IDSCO6759 TypeCDS
From1151491 nt length912
To1150580 aa length303
GenehopE pI5.24
Definitionputative phytoene synthase M.W (Da)32770
NoteSC6A5.08 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1654 squalene/phytoene synthase4409.0e-125
sgrSGR_966 putative squalene/phytoene synthase4423.0e-125
samSAM23877_6410 putative phytoene synthase5070.0e+00
scabSCAB13001 squalene/phytoene synthase4553.0e-129
saceSACE_4331 squalene/phytoene synthase1801.0e-46

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SQS_PSY1Squalene/phytoene synthase19-284229.25.4e-68

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011031161.1 MULTISPECIES: squalene synthase HpnC [Streptomyces] >gb 11525.2e-157
WP_003972237.1 MULTISPECIES: squalene synthase HpnC [Streptomyces] >gb 11456.2e-156
WP_106518480.1 MULTISPECIES: squalene synthase HpnC [Streptomyces] >gb 11343.1e-154
WP_210985244.1 squalene synthase HpnC [Streptomyces sp. RK76] >lcl 11343.1e-154
WP_121715943.1 squalene synthase HpnC [Streptomyces sp. E5N91] 11343.5e-154
WP_109028704.1 squalene synthase HpnC [Streptomyces rubrogriseus] 11333.5e-154
WP_164273851.1 squalene synthase HpnC [Streptomyces rubrogriseus] >gb 11325.4e-154
WP_093457456.1 MULTISPECIES: squalene synthase HpnC [unclassified Streptomy... 11273.6e-153
WP_159325863.1 squalene synthase HpnC [Streptomyces tendae] >dbj 11212.5e-152
WP_115745371.1 squalene synthase HpnC [Streptomyces sp. CB09001] >gb 11203.6e-152

PSORT result

LocalizationCertaintyPSORT said
Not Clear