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IDSCO6802 TypeCDS
From1104636 nt length579
To1104058 aa length192
Gene pI6.13
Definitionputative DNA-binding protein M.W (Da)20855
NoteSC1A2.11 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_6437 putative transcriptional regulator3413.0e-122

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix19-7153.12.2e-14

HTH_311Helix-turn-helix domain14-6951.77.4e-14

HTH_191Helix-turn-helix domain17-7535.57.3e-09

HTH_261Cro/C1-type HTH DNA-binding domain18-7432.48.2e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972196.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 8881.6e-120
WP_193487196.1 XRE family transcriptional regulator [Streptomyces anthocyan... 8848.7e-120
WP_136208548.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 8803.0e-119
WP_030870397.1 MULTISPECIES: XRE family transcriptional regulator [Streptom... 8761.2e-118
WP_164276657.1 XRE family transcriptional regulator [Streptomyces rubrogris... 8664.5e-117
WP_109028737.1 XRE family transcriptional regulator [Streptomyces rubrogris... 8665.0e-117
MYS72397.1 helix-turn-helix domain-containing protein [Streptomyces sp. SID5... 8621.5e-116
WP_164457424.1 helix-turn-helix domain-containing protein [Streptomyces ten... 8621.5e-116
WP_127895664.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8551.8e-115
WP_210918087.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 8525.4e-115

PSORT result

LocalizationCertaintyPSORT said
Not Clear