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IDSCO6849 TypeCDS
From1044323 nt length1728
To1046050 aa length575
Gene pI6.8
Definitionputative membrane protein (fragment). M.W (Da)61102
NoteSC3D9.17c SC7F9.01c AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4509 putative conjugative transfer gene complex protein2911.0e-79
samSAM23877_6500 putative membrane protein4101.0e-137
scabSCAB33161 putative conjugative transfer gene complex protein10300.0e+00

*avm, Streptomyces avermitilis; sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TraG-D_C1TraM recognition site of TraD and TraG398-516111.13.1e-32

T4SS-DNA_transf1Type IV secretory system Conjugative DNA transfer151-54382.32.8e-23

TrwB_AAD_bind1Type IV secretion-system coupling protein DNA-binding domain213-51849.92e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAD55390.1 putative membrane protein [Streptomyces coelicolor A3(2)] 26980.0e+00
WP_134112156.1 MULTISPECIES: type IV secretory system conjugative DNA trans... 26960.0e+00
WP_108988914.1 MULTISPECIES: type IV secretory system conjugative DNA trans... 26040.0e+00
WP_161231074.1 type IV secretory system conjugative DNA transfer family pro... 25910.0e+00
WP_216717511.1 TraM recognition domain-containing protein [Streptomyces sp.... 25700.0e+00
WP_055469723.1 type IV secretory system conjugative DNA transfer family pro... 25410.0e+00
WP_130442822.1 type IV secretory system conjugative DNA transfer family pro... 25410.0e+00
WP_030870455.1 type IV secretory system conjugative DNA transfer family pro... 25360.0e+00
WP_217572325.1 TraM recognition domain-containing protein [Streptomyces sp.... 25050.0e+00
WP_189722385.1 type IV secretory system conjugative DNA transfer family pro... 24960.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear