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IDSCO6996 TypeCDS
From899746 nt length576
To899171 aa length191
Gene pI6.94
Definitionputative RNA polymerase sigma factor M.W (Da)21293
NoteSC8F11.22 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_6533 putative RNA polymerase sigma factor3371.0e-120
saceSACE_6998 RNA polymerase sigma factor1415.0e-35

*sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 225-9043.51.8e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
EFD65214.1 RNA polymerase sigma factor [Streptomyces lividans TK24] >gb 8933.2e-121
WP_173668836.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 8928.7e-121
WP_174854968.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ru... 8929.6e-121
WP_030870319.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 8929.9e-121
OWA12423.1 RNA polymerase subunit sigma-24 [Streptomyces sp. CS113] 8891.1e-120
AIJ11876.1 RNA polymerase sigma factor [Streptomyces lividans TK24] >gb 8921.1e-120
PSK44983.1 hypothetical protein B0E38_07460 [Streptomyces sp. 111WW2] 8921.2e-120
AXL93578.1 RNA polymerase subunit sigma-24 [Streptomyces sp. CB09001] >gb 8863.8e-120
WP_193783564.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 8884.2e-120
GHA93732.1 RNA polymerase sigma factor [Streptomyces tendae] 8884.7e-120

PSORT result

LocalizationCertaintyPSORT said
Not Clear