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IDSCO7099 TypeCDS
From777340 nt length903
To778242 aa length300
Gene pI8.93
Definitionputative RNA polymerase sigma factor M.W (Da)32523
NoteSC3A4.25c AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_0482 putative RNA polymerase sigma factor3092.0e-106

*sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011031429.1 MULTISPECIES: RNA polymerase sigma factor [Streptomyces] >lc... 12132.4e-166
WP_136207441.1 RNA polymerase subunit sigma [Streptomyces sp. LRa12] >lcl 12071.9e-165
WP_003972044.1 MULTISPECIES: hypothetical protein [Streptomyces] >gb 11966.7e-164
WP_159324489.1 RNA polymerase subunit sigma [Streptomyces tendae] 11662.6e-159
WP_087810921.1 RNA polymerase subunit sigma [Streptomyces sp. CS113] >gb 11662.6e-159
WP_059296938.1 hypothetical protein [Streptomyces canus] 11575.8e-158
WP_006131901.1 hypothetical protein [Streptomyces gancidicus] >gb 11151.5e-151
WP_104633654.1 RNA polymerase subunit sigma [Streptomyces sp. MH60] >gb 11091.2e-150
WP_109030487.1 RNA polymerase subunit sigma [Streptomyces rubrogriseus] 11031.1e-149
WP_134656129.1 RNA polymerase subunit sigma [Streptomyces sp. H23] 10994.6e-149

PSORT result

LocalizationCertaintyPSORT said
Not Clear