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IDSCO7112 TypeCDS
From765252 nt length897
To766148 aa length298
Gene pI6.27
Definitionputative ECF-family RNA polymerase sigma factor M.W (Da)32827
NoteSC4B10.13c AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
samSAM23877_0480 putative ECF-family RNA polymerase sigma factor4892.0e-177
saceSACE_1418 putative ECF-family RNA polymerase sigma factor2102.0e-55

*sam, Streptomyces ambofaciens ATCC 23877; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 221-8463.79e-18

Sigma70_r4_21Sigma-70, region 4113-16545.73.3e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003972031.1 MULTISPECIES: RNA polymerase sigma-70 factor [Streptomyces] ... 14430.0e+00
WP_161379768.1 MULTISPECIES: RNA polymerase sigma-70 factor [Streptomyces] ... 14350.0e+00
WP_059296926.1 RNA polymerase sigma-70 factor [Streptomyces canus] 14330.0e+00
WP_159324477.1 RNA polymerase sigma-70 factor [Streptomyces tendae] 14310.0e+00
WP_109030500.1 RNA polymerase sigma-70 factor [Streptomyces rubrogriseus] >... 14270.0e+00
WP_122614584.1 RNA polymerase sigma-70 factor [Streptomyces sp. Tu 4128] 14210.0e+00
WP_087810934.1 RNA polymerase sigma-70 factor [Streptomyces sp. CS113] >gb 14170.0e+00
WP_161328129.1 RNA polymerase sigma-70 factor [Streptomyces sp. SID5789] >g... 14150.0e+00
WP_104633641.1 RNA polymerase sigma-70 factor [Streptomyces sp. MH60] >gb 14140.0e+00
WP_212729309.1 RNA polymerase sigma-70 factor [Streptomyces sp. V17-9] >gb 14080.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear