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IDSCO7192 TypeCDS
From671879 nt length666
To671214 aa length221
Gene pI7.89
Definitionputative sigma factor M.W (Da)23778
NoteSC8A11.20 AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4137-18743.71.4e-11

Sigma70_r21Sigma-70 region 239-9838.09.4e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
MYU46696.1 RNA polymerase subunit sigma-70 [Streptomyces sp. SID7813] >gb 7581.1e-99
WP_210985227.1 RNA polymerase subunit sigma-70 [Streptomyces sp. RK76] >lcl... 7571.6e-99
WP_161270383.1 MULTISPECIES: RNA polymerase subunit sigma-70 [Streptomyces]... 7592.1e-99
WP_189284446.1 RNA polymerase subunit sigma-70 [Streptomyces anthocyanicus]... 7553.0e-99
WP_136208754.1 RNA polymerase subunit sigma-70 [Streptomyces sp. LRa12] >lc... 7482.6e-98
WP_093457579.1 MULTISPECIES: RNA polymerase subunit sigma-70 [unclassified ... 7473.6e-98
WP_078653426.1 MULTISPECIES: RNA polymerase subunit sigma-70 [Streptomyces]... 7474.3e-98
AIJ11691.2 sigma factor [Streptomyces lividans TK24] >gb 7465.9e-98
EFD65017.1 sigma factor [Streptomyces lividans TK24] 7498.0e-98
WP_159326196.1 RNA polymerase subunit sigma-70 [Streptomyces tendae] 6667.6e-86

PSORT result

LocalizationCertaintyPSORT said
Not Clear