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IDSCO7279 TypeCDS
From581013 nt length474
To580540 aa length157
Gene pI11.71
Definitionpossible DNA-binding protein M.W (Da)16729
NoteSC5H1.13c AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1148 putative DNA-binding protein1101.0e-25
sgrSGR_2603 putative DNA-binding protein1008.0e-23
samSAM23877_0935 putative DNA-binding protein1654.0e-54

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix67-12137.61.5e-09

HTH_311Helix-turn-helix domain64-12337.52.1e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011031561.1 helix-turn-helix domain-containing protein [Streptomyces coe... 2641.0e-26
WP_193487086.1 helix-turn-helix domain-containing protein [Streptomyces ant... 2631.6e-26
WP_153181244.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 2518.9e-25
WP_121715751.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 2501.0e-24
WP_189284420.1 helix-turn-helix transcriptional regulator [Streptomyces ant... 2501.1e-24
WP_087792351.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 2491.5e-24
WP_164385877.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 2491.6e-24
WP_030866833.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 2491.6e-24
KPC86209.1 DNA-binding protein [Streptomyces sp. NRRL WC-3753] 2481.9e-24
NEB16966.1 helix-turn-helix transcriptional regulator [Streptomyces coelicof... 2481.9e-24

PSORT result

LocalizationCertaintyPSORT said
Not Clear