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IDSGR_1081 TypeCDS
From1274806 nt length1986
To1272821 aa length661
GeneproW pI10.98
Definitionputative glycine betaine ABC transporer permease protein M.W (Da)67956
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3431 putative glycine betaine ABC transporter permease protein6600.0e+00
coelSCO4831 putative glycine betaine ABC transport system integral membrane protein7630.0e+00
samSAM23877_4646 putative glycine betaine ABC transport system integral membrane protein8020.0e+00
kanCP970_16650 ABC transporter permease subunit8030.0e+00
scabSCAB6981 putative glycine betaine ABC transporter permease protein3721.0e-103

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_12Binding-protein-dependent transport system inner membrane component169-337, 488-644116.21.3e-33

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_161184140.1 ABC transporter permease subunit [Streptomyces sp. SID724] >... 22570.0e+00
WP_164364612.1 ABC transporter permease subunit, partial [Streptomyces gris... 22550.0e+00
WP_003964973.1 MULTISPECIES: ABC transporter permease subunit [Streptomyces... 22510.0e+00
WP_093682981.1 MULTISPECIES: ABC transporter permease subunit [unclassified... 22500.0e+00
WP_030700518.1 ABC transporter permease subunit [Streptomyces griseus] 22500.0e+00
WP_219204894.1 ABC transporter permease subunit [Streptomyces griseus] >lcl... 22490.0e+00
WP_218924361.1 ABC transporter permease subunit, partial [Streptomyces sp. ... 22470.0e+00
WP_097977930.1 ABC transporter permease subunit [Streptomyces sp. gb14] 22460.0e+00
WP_161320672.1 ABC transporter permease subunit [Streptomyces sp. SID5614] ... 22460.0e+00
WP_205084081.1 ABC transporter permease subunit [Streptomyces sp. RHZ10] >l... 22460.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear