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IDSGR_1095 TypeCDS
From1292213 nt length1959
To1290255 aa length652
GenerbsBC pI9.69
Definitionputative D-ribose ABC transporter substrate-binding/permease protein M.W (Da)64914
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5318 putative D-ribose ABC transporter substrate-binding protein/permease protein7760.0e+00
coelSCO2747 bifunctional carbohydrate binding and transport protein.9800.0e+00
samSAM23877_2772 Ribose ABC transport system%2C permease protein RbsC9350.0e+00
kanCP970_09620 transporter10500.0e+00
scabSCAB58711 putative LacI-family transcriptional regulator, ribose operon repressor3751.0e-104
saceSACE_5660 putative D-ribose ABC transporter permease protein6550.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Peripla_BP_41Periplasmic binding protein domain378-630216.54.2e-64

BPD_transp_21Branched-chain amino acid transport system / permease component52-315158.12.2e-46

Peripla_BP_11Periplasmic binding proteins and sugar binding domain of LacI family376-64280.31.5e-22

Peripla_BP_31Periplasmic binding protein-like domain500-64756.53.5e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003964986.1 MULTISPECIES: substrate-binding domain-containing protein [S... 22970.0e+00
WP_030700528.1 substrate-binding domain-containing protein [Streptomyces gr... 22940.0e+00
WP_093682975.1 substrate-binding domain-containing protein [Streptomyces sp... 22910.0e+00
WP_097866952.1 substrate-binding domain-containing protein [Streptomyces sp... 22820.0e+00
WP_032790912.1 substrate-binding domain-containing protein [Streptomyces sp... 22800.0e+00
WP_219613048.1 substrate-binding domain-containing protein [Streptomyces an... 22800.0e+00
WP_047179731.1 substrate-binding domain-containing protein [Streptomyces sp... 22750.0e+00
WP_217226962.1 substrate-binding domain-containing protein [Streptomyces an... 22750.0e+00
WP_087764292.1 substrate-binding domain-containing protein [Streptomyces sp... 22750.0e+00
WP_097966226.1 substrate-binding domain-containing protein [Streptomyces sp... 22740.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear