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IDSGR_1123 TypeCDS
From1325587 nt length1044
To1324544 aa length347
Gene pI10.54
Definitionputative transmembrane protein M.W (Da)36077
Note AseI frg.A
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1844 putative transmembrane protein4492.0e-127
coelSCO6556 putative transmembrane protein4914.0e-140
samSAM23877_6256 conserved membrane protein of unknown function4473.0e-159
kanCP970_05550 bile acid:sodium symporter5060.0e+00
scabSCAB16921 putative transmembrane protein4402.0e-124
saceSACE_0759 bile acid:sodium symporter2993.0e-82
nfarnfa30700 putative membrane protein2878.0e-79

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SBF_like1SBF-like CPA transporter family (DUF4137)16-320298.93.9e-89

SBF1Sodium Bile acid symporter family53-22050.41.8e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003965017.1 MULTISPECIES: bile acid:sodium symporter [unclassified Strep... 13400.0e+00
WP_093682960.1 MULTISPECIES: bile acid:sodium symporter [unclassified Strep... 13330.0e+00
WP_012378318.1 MULTISPECIES: bile acid:sodium symporter [Streptomyces] >lcl... 13310.0e+00
WP_164360374.1 bile acid:sodium symporter [Streptomyces griseus] >gb 13300.0e+00
WP_093562793.1 bile acid:sodium symporter [Streptomyces sp. OspMP-M43] >emb... 13270.0e+00
WP_030700542.1 bile acid:sodium symporter [Streptomyces griseus] 13220.0e+00
WP_057666808.1 MULTISPECIES: bile acid:sodium symporter [Streptomyces] >gb 12841.1e-175
WP_050359133.1 bile acid:sodium symporter [Streptomyces europaeiscabiei] >g... 12812.8e-175
WP_073805397.1 MULTISPECIES: bile acid:sodium symporter [unclassified Strep... 12813.3e-175
WP_056705861.1 MULTISPECIES: bile acid:sodium symporter [unclassified Strep... 12813.6e-175

PSORT result

LocalizationCertaintyPSORT said
Not Clear