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IDSGR_1133 TypeCDS
From1335228 nt length822
To1336049 aa length273
Gene pI6.26
Definitionputative DNA-binding protein M.W (Da)29716
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1860 putative DNA-binding protein3324.0e-92
coelSCO6539 hypothetical protein3662.0e-102
samSAM23877_6244 hypothetical protein3652.0e-129
kanCP970_05725 XRE family transcriptional regulator3505.0e-123
scabSCAB17071 putative DNA-binding protein3649.0e-102
saceSACE_7094 transcriptional regulator, XRE family2323.0e-62

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain11-7149.24.5e-13

HTH_31Helix-turn-helix14-6746.13.3e-12

HTH_191Helix-turn-helix domain13-6638.67.6e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030700550.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 12843.3e-178
WP_003965029.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 12835.3e-178
WP_215104868.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12499.1e-173
WP_210990896.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12341.7e-170
WP_056705880.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 12323.2e-170
WP_073869027.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 12323.3e-170
WP_069756234.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 12323.6e-170
WP_219613002.1 helix-turn-helix domain-containing protein [Streptomyces anu... 12323.9e-170
WP_073805408.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 12314.8e-170
WP_073959626.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12299.9e-170

PSORT result

LocalizationCertaintyPSORT said
Not Clear