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IDSGR_1236 TypeCDS
From1460309 nt length270
To1460040 aa length89
Gene pI8.55
Definitionputative DNA-binding protein M.W (Da)9076
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1955 putative DNA-binding protein1003.0e-23
coelSCO6410 hypothetical protein1266.0e-31
samSAM23877_6026 hypothetical protein1241.0e-39
kanCP970_07155 XRE family transcriptional regulator1176.0e-37
scabSCAB18051 1242.0e-30
saceSACE_3597 transcriptional regulator, XRE family1002.0e-23

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain16-7447.02.3e-12

HTH_31Helix-turn-helix22-7431.71.1e-07

HTH_261Cro/C1-type HTH DNA-binding domain22-7723.35.7e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003965145.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 1937.8e-18
WP_030594227.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 1868.7e-17
SBV04505.1 Predicted transcriptional regulators [Streptomyces sp. MnatMP-M7... 1821.9e-16
WP_007454838.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 1823.5e-16
WP_018961443.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 1823.5e-16
WP_073743374.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 1824.0e-16
WP_103530578.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 1824.3e-16
WP_050357385.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 1824.3e-16
WP_097968438.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 1815.6e-16
WP_096625356.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 1791.1e-15

PSORT result

LocalizationCertaintyPSORT said
Not Clear