-- | --

IDSGR_1386 TypeCDS
From1620732 nt length771
To1619962 aa length256
Gene pI8.98
Definitionputative AraC-family transcriptional regulator M.W (Da)26754
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2119 putative AraC-family transcriptional regulator2071.0e-54
coelSCO6119 putative AraC family transcriptional regulator2286.0e-61
samSAM23877_5831 putative HTH-type transcriptional regulator in mcrB 3'region2199.0e-73
kanCP970_09240 helix-turn-helix domain-containing protein2186.0e-72
scabSCAB19661 putative AraC-family transcriptional regulator2093.0e-55
saceSACE_1408 AraC family transcriptional regulator1125.0e-26
nfarnfa44620 putative transcriptional regulator2001.0e-52

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain160-23551.77e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012378490.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 10782.3e-147
WP_161185450.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10731.7e-146
WP_003965427.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 10689.0e-146
WP_093684602.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 10583.1e-144
WP_215101633.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10036.9e-136
WP_190007108.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 9846.3e-133
WP_098892782.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9846.4e-133
WP_087764462.1 AraC family transcriptional regulator [Streptomyces sp. CS05... 9811.6e-132
WP_050357248.1 helix-turn-helix domain-containing protein [Streptomyces eur... 9811.8e-132
WP_164341296.1 helix-turn-helix domain-containing protein [Streptomyces anu... 9793.0e-132

PSORT result

LocalizationCertaintyPSORT said
Not Clear