-- | --

IDSGR_1442 TypeCDS
From1683763 nt length924
To1682840 aa length307
Gene pI5.87
Definitionputative LysR-family transcriptional regulator M.W (Da)32218
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1626 putative LysR-family transcriptional regulator4146.0e-117
coelSCO6801 putative LysR-family transcriptional regulator.4662.0e-132
samSAM23877_6436 putative LysR-family transcriptional regulator4693.0e-169
kanCP970_04205 LysR family transcriptional regulator4643.0e-167
scabSCAB12661 putative LysR-family transcriptional regulator4545.0e-129
saceSACE_6391 LysR-family transcriptional regulator2931.0e-80
nfarnfa3060 putative transcriptional regulator1371.0e-33

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain88-296128.22.4e-37

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family5-6370.48e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003965483.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 11473.4e-156
WP_219566031.1 LysR family transcriptional regulator [Streptomyces griseus] 11473.5e-156
WP_030709921.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 11223.0e-152
WP_089116960.1 LysR family transcriptional regulator [Streptomyces sp. SS07... 11196.1e-152
WP_044377331.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 11171.4e-151
WP_032775204.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 11152.5e-151
WP_032786930.1 MULTISPECIES: LysR family transcriptional regulator [unclass... 11152.5e-151
WP_098893111.1 LysR family transcriptional regulator [Streptomyces sp. or3] 11153.2e-151
NED01474.1 LysR family transcriptional regulator [Streptomyces sp. SID6648] 11153.4e-151
WP_065477699.1 LysR family transcriptional regulator [Streptomyces sp. PTY0... 11143.5e-151

PSORT result

LocalizationCertaintyPSORT said
Not Clear