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IDSGR_1808 TypeCDS
From2149872 nt length900
To2148973 aa length299
GenetruB pI6.81
Definitionputative tRNA pseudouridine synthase M.W (Da)31519
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2548 putative tRNA pseudouridine synthase4462.0e-126
coelSCO5709 probable tRNA pseudouridine synthase4831.0e-137
samSAM23877_5430 tRNA pseudouridine synthase B4951.0e-179
kanCP970_11795 tRNA pseudouridine(55) synthase TruB5010.0e+00
scabSCAB25321 putative tRNA pseudouridine synthase5016.0e-143
saceSACE_5919 hypothetical protein2863.0e-78
nfarnfa40530 putative tRNA pseudouridine synthase2615.0e-71

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TruB_N1TruB family pseudouridylate synthase (N terminal domain)31-187156.07.7e-46

TruB_C1tRNA Pseudouridine synthase II, C terminal243-29960.01.2e-16

TruB_C_21tRNA pseudouridylate synthase B C-terminal domain188-22840.81.7e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_093565079.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. OspMP... 14790.0e+00
WP_003965879.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [Streptom... 14790.0e+00
WP_164360855.1 tRNA pseudouridine(55) synthase TruB [Streptomyces griseus] ... 14750.0e+00
WP_215102971.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. McG3]... 14720.0e+00
WP_093683761.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [unclassi... 14720.0e+00
WP_219205122.1 tRNA pseudouridine(55) synthase TruB [Streptomyces griseus] ... 14720.0e+00
WP_217230888.1 tRNA pseudouridine(55) synthase TruB [Streptomyces anulatus] 14620.0e+00
WP_007450962.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [Streptom... 14600.0e+00
WP_073802910.1 MULTISPECIES: tRNA pseudouridine(55) synthase TruB [unclassi... 14590.0e+00
WP_097962367.1 tRNA pseudouridine(55) synthase TruB [Streptomyces sp. or20] 14560.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear