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IDSGR_1888 TypeCDS
From2236690 nt length240
To2236451 aa length79
Gene pI7.72
Definitionconserved hypothetical protein M.W (Da)8560
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2643 hypothetical protein1143.0e-27
coelSCO5592 hypothetical protein1428.0e-36
samSAM23877_5348 hypothetical protein1424.0e-47
kanCP970_12185 RNA-binding protein1446.0e-48
scabSCAB26181 hypothetical protein1399.0e-35
saceSACE_6052 hypothetical protein1081.0e-25
nfarnfa41560 hypothetical protein1011.0e-23

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

KH_41KH domain3-6469.91.1e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003965959.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 3081.1e-35
WP_015611679.1 MULTISPECIES: RNA-binding protein [Streptomyces] >lcl 3081.5e-35
WP_075264001.1 RNA-binding protein [Streptomyces sp. Tue 6075] >gb 3062.6e-35
WP_073771547.1 MULTISPECIES: RNA-binding protein [unclassified Streptomyces... 3053.7e-35
WP_168481574.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 3053.7e-35
WP_003980229.1 MULTISPECIES: RNA-binding protein [Streptomycetaceae] >gb 3054.1e-35
WP_052859899.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 3044.3e-35
WP_077969807.1 RNA-binding protein [Streptomyces tsukubensis] >gb 3044.9e-35
WP_105973760.1 RNA-binding protein [Streptomyces geranii] 3011.3e-34
WP_004944869.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 3011.3e-34

PSORT result

LocalizationCertaintyPSORT said
Not Clear