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IDSGR_1892 TypeCDS
From2240845 nt length1551
To2239295 aa length516
Geneffh pI9.82
Definitionputative signal recognition particle M.W (Da)55110
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2648 putative signal recognition particle, subunit SRP547650.0e+00
coelSCO5586 signal recognition particle protein8430.0e+00
samSAM23877_5342 Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)8600.0e+00
kanCP970_12215 signal recognition particle protein8460.0e+00
scabSCAB26231 putative signal recognition particle, subunit SRP548530.0e+00
saceSACE_6057 signal recognition particle GTPase6580.0e+00
nfarnfa41600 putative signal recognition particle protein6253.0e-180

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SRP541SRP54-type protein, GTPase domain100-297230.21.5e-68

SRP_SPB1Signal peptide binding domain334-431106.39.2e-31

SRP54_N1SRP54-type protein, helical bundle domain5-8275.33.1e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003965963.1 signal recognition particle protein [Streptomyces sp. ACT-1]... 23340.0e+00
WP_012378847.1 MULTISPECIES: signal recognition particle protein [Streptomy... 23340.0e+00
WP_098894825.1 signal recognition particle protein [Streptomyces sp. t99] 23270.0e+00
WP_030715613.1 MULTISPECIES: signal recognition particle protein [Streptomy... 23250.0e+00
WP_047179036.1 MULTISPECIES: signal recognition particle protein [unclassif... 23220.0e+00
WP_137234474.1 MULTISPECIES: signal recognition particle protein [unclassif... 23210.0e+00
WP_010061967.1 signal recognition particle protein [Streptomyces globisporu... 23210.0e+00
WP_073820793.1 MULTISPECIES: signal recognition particle protein [Streptomy... 23210.0e+00
WP_032789173.1 MULTISPECIES: signal recognition particle protein [unclassif... 23200.0e+00
WP_097973029.1 MULTISPECIES: signal recognition particle protein [unclassif... 23200.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear