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IDSGR_1907 TypeCDS
From2260253 nt length861
To2259393 aa length286
GenemutM1 pI9.65
Definitionputative formamidopyrimidine-DNA glycosylase M.W (Da)31851
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2664 putative formamidopyrimidine-DNA glycosylase4617.0e-131
coelSCO5573 formamidopyrimidine-DNA glycosylase4746.0e-135
samSAM23877_5326 Formamidopyrimidine-DNA glycosylase4775.0e-173
kanCP970_12290 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase4911.0e-178
scabSCAB26381 putative formamidopyrimidine-DNA glycosylase4653.0e-132
saceSACE_6099 formamidopyrimidine-DNA glycosylase3716.0e-104
nfarnfa41830 putative formamidopyrimidine-DNA glycosylase3377.0e-94

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Fapy_DNA_glyco1Formamidopyrimidine-DNA glycosylase N-terminal domain1-121114.05.1e-33

H2TH1Formamidopyrimidine-DNA glycosylase H2TH domain139-22671.73.5e-20

zf-FPG_IleRS1Zinc finger found in FPG and IleRS252-27930.42.4e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012378857.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 14030.0e+00
WP_030704880.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 14000.0e+00
WP_003965978.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13990.0e+00
WP_093562651.1 MULTISPECIES: bifunctional DNA-formamidopyrimidine glycosyla... 13940.0e+00
WP_202465282.1 MULTISPECIES: bifunctional DNA-formamidopyrimidine glycosyla... 13840.0e+00
WP_202476377.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13810.0e+00
WP_030589396.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13810.0e+00
WP_124264944.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13790.0e+00
WP_097867908.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13770.0e+00
WP_030580426.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13750.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear