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IDSGR_216 TypeCDS
From224295 nt length1341
To225635 aa length446
Gene pI6.51
Definitionputative secreted pectate lyase M.W (Da)47562
Note AseI frg.F
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6375 putative secreted pectate lyase4371.0e-123
coelSCO1880 putative secreted pectate lyase4585.0e-130
samSAM23877_1954 Pectate lyase4632.0e-162
scabSCAB70551 putative secreted pectate lyase4733.0e-134

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Pec_lyase_C1Pectate lyase149-361176.25.8e-52

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012377621.1 MULTISPECIES: pectate lyase [Streptomyces] >dbj 21430.0e+00
WP_219204642.1 pectate lyase [Streptomyces griseus] >lcl 21360.0e+00
WP_161186981.1 pectate lyase [Streptomyces sp. SID724] >gb 21280.0e+00
WP_093684348.1 MULTISPECIES: pectate lyase [unclassified Streptomyces] >gb 21250.0e+00
WP_003964084.1 MULTISPECIES: pectate lyase [unclassified Streptomyces] >gb 21230.0e+00
SCE57606.1 pectate lyase [Streptomyces sp. OspMP-M43] 20560.0e+00
WP_093564209.1 pectate lyase [Streptomyces sp. OspMP-M43] 20480.0e+00
WP_215110755.1 pectate lyase [Streptomyces sp. McG3] >lcl 20230.0e+00
WP_164363406.1 pectate lyase, partial [Streptomyces griseus] >gb 20220.0e+00
WP_219613856.1 pectate lyase [Streptomyces anulatus] >gb 19990.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear