-- | --

IDSGR_2195 TypeCDS
From2605405 nt length1188
To2604218 aa length395
Geneku1 pI9.79
Definitionputative Ku70/Ku80 protein M.W (Da)41600
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2945 putative Ku70/Ku80 protein3862.0e-108
coelSCO5309 hypothetical protein4562.0e-129
samSAM23877_5082 Non-homologous end joining protein Ku4261.0e-149
kanCP970_13910 Ku protein4337.0e-153
scabSCAB29491 putative Ku70/Ku80 protein4194.0e-118
saceSACE_3709 DNA binding protein, Ku-like2142.0e-56
nfarnfa34910 hypothetical protein1894.0e-49

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ku1Ku70/Ku80 beta-barrel domain11-177108.43.4e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012379039.1 Ku protein [Streptomyces griseus] >sp 14980.0e+00
NEB57836.1 Ku protein [Streptomyces griseus] 14930.0e+00
WP_030702754.1 Ku protein [Streptomyces griseus] 14910.0e+00
WP_069456044.1 Ku protein, partial [Streptomyces griseus] 14900.0e+00
MYR14307.1 Ku protein [Streptomyces sp. SID724] 14880.0e+00
WP_093682836.1 Ku protein [Streptomyces sp. MnatMP-M77] >gb 14860.0e+00
WP_093565623.1 Ku protein [Streptomyces sp. OspMP-M43] >emb 14850.0e+00
WP_003966281.1 Ku protein [Streptomyces sp. ACT-1] >gb 14810.0e+00
WP_202549557.1 Ku protein [Streptomyces sp. SID7816] 14280.0e+00
WP_203639449.1 Ku protein [Streptomyces griseus] 14230.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear