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IDSGR_2241 TypeCDS
From2658710 nt length489
To2658222 aa length162
Gene pI10.72
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)18094
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
kanCP970_33490 SigE family RNA polymerase sigma factor1142.0e-33
saceSACE_1454 RNA polymerase ECF sigma factor1291.0e-31

*kan, Streptomyces kanamyceticus ATCC 12853; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4103-15357.38e-16

Sigma70_r41Sigma-70, region 4106-15546.91.3e-12

Sigma70_r21Sigma-70 region 213-7931.69.1e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012379071.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 5801.5e-74
WP_206978392.1 SigE family RNA polymerase sigma factor [Streptomyces sp. M5... 5722.4e-73
WP_003966338.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 5722.7e-73
WP_179181484.1 SigE family RNA polymerase sigma factor [Streptomyces sp. CB... 5696.9e-73
WP_199940590.1 MULTISPECIES: SigE family RNA polymerase sigma factor [uncla... 5697.0e-73
WP_030850364.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 5681.0e-72
WP_030702803.1 SigE family RNA polymerase sigma factor [Streptomyces griseu... 5681.0e-72
WP_030198881.1 SigE family RNA polymerase sigma factor [Streptomyces califo... 5681.0e-72
WP_093900735.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 5671.9e-72
WP_030113563.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 5662.5e-72

PSORT result

LocalizationCertaintyPSORT said
Not Clear