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IDSGR_240 TypeCDS
From256909 nt length939
To257847 aa length312
Genesig3 pI9.45
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)33630
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_424 putative RNA polymerase ECF-subfamily sigma factor4222.0e-119
coelSCO0159 putative ECF sigma factor4348.0e-123
samSAM23877_0352 putative RNA polymerase ECF-subfamily sigma factor4833.0e-174

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 211-7264.35.9e-18

Sigma70_r4_21Sigma-70, region 4108-15950.21.3e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012377640.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 11911.3e-162
WP_003964108.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 11752.7e-160
WP_093683896.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 11735.3e-160
WP_161184522.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 11641.6e-158
WP_219205215.1 sigma-70 family RNA polymerase sigma factor [Streptomyces gr... 11671.3e-157
WP_215111083.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 11051.3e-149
WP_210935632.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 11051.4e-149
WP_097932590.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 11051.5e-149
WP_217230448.1 sigma-70 family RNA polymerase sigma factor [Streptomyces an... 11023.6e-149
WP_073746586.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 11016.2e-149

PSORT result

LocalizationCertaintyPSORT said
Not Clear