SGR_2420

ID SGR_2420 Type CDS
From 2860950 nt length 2469
To 2858482 aa length 822
Gene pI 6.21
Definition putative lipoprotein M.W (Da) 86295
Note AseI frg. A
SignalP v.4.0 Signal peptide | plot Category

Orthologs (if any)

Bacteria*	Reciprocally best hit to	Score	E-value
avm	SAVERM_3178 putative lipoprotein	724	0.0e+00
coel	SCO5110 putative lipoprotein	285	1.0e-77
sam	SAM23877_4888 putative lipoprotein	806	0.0e+00
kan	CP970_15115 ABC transporter family substrate-binding protein	631	0.0e+00
scab	SCAB31571 putative lipoprotein	886	0.0e+00
sace	SACE_1006 extracellular solute-binding protein, family 5	118	3.0e-27
nfar	nfa1650 putative ABC transporter substrate-binding protein	196	9.0e-51

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

Model No. Description Position (aa) Score E-value

SBP_bac_5 2 Bacterial extracellular solute-binding proteins, family 5 Middle 107-290, 351-455 151.4 2.9e-44

BLAST search result (top 10 hits)

ID Description Score E-value
WP_030702950.1 ABC transporter substrate-binding protein [Streptomyces gris... 3193 0.0e+00
WP_012379183.1 MULTISPECIES: ABC transporter substrate-binding protein [Str... 3192 0.0e+00
WP_093682751.1 MULTISPECIES: ABC transporter substrate-binding protein [unc... 3187 0.0e+00
WP_003966531.1 MULTISPECIES: ABC transporter substrate-binding protein [unc... 3185 0.0e+00
WP_073802438.1 MULTISPECIES: ABC transporter substrate-binding protein [unc... 2991 0.0e+00
WP_047178611.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 2972 0.0e+00
WP_097963867.1 ABC transporter substrate-binding protein [Streptomyces sp. ... 2971 0.0e+00
WP_050360601.1 ABC transporter substrate-binding protein [Streptomyces euro... 2971 0.0e+00
WP_056700795.1 MULTISPECIES: ABC transporter family substrate-binding prote... 2970 0.0e+00
WP_190006478.1 ABC transporter family substrate-binding protein [Streptomyc... 2969 0.0e+00

PSORT result

Localization Certainty PSORT said
Not Clear

ID	SGR_2420	Type	CDS
From	2860950	nt length	2469
To	2858482	aa length	822
Gene		pI	6.21
Definition	putative lipoprotein	M.W (Da)	86295
Note		AseI frg.	A
SignalP v.4.0	Signal peptide \| plot	Category

	Model	No.	Description	Position (aa)	Score	E-value
	SBP_bac_5	2	Bacterial extracellular solute-binding proteins, family 5 Middle	107-290, 351-455	151.4	2.9e-44