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IDSGR_2474 TypeCDS
From2916963 nt length1212
To2918174 aa length403
GenexseA pI6.21
Definitionputative exoribonuclease large subunit M.W (Da)43797
Note AseI frg.A
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3211 putative exoribonuclease large subunit5931.0e-170
coelSCO5056 putative exoribonuclease large subunit6420.0e+00
samSAM23877_4854 Exodeoxyribonuclease 7 large subunit6400.0e+00
kanCP970_15345 exodeoxyribonuclease VII large subunit6490.0e+00
scabSCAB33481 putative exoribonuclease large subunit6630.0e+00
saceSACE_0937 putative exodeoxyribonuclease VII large subunit4172.0e-117
nfarnfa47970 putative exodeoxyribonuclease VII large subunit4053.0e-114

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Exonuc_VII_L2Exonuclease VII, large subunit129-345, 336-399233.53.7e-69

tRNA_anti_21OB-fold nucleic acid binding domain12-10666.12.1e-18

tRNA_anti-codon1OB-fold nucleic acid binding domain31-10740.61.7e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
SEE91622.1 Exodeoxyribonuclease VII large subunit [Streptomyces griseus] >e... 19370.0e+00
WP_012379226.1 MULTISPECIES: exodeoxyribonuclease VII large subunit [Strept... 19350.0e+00
SBU88172.1 Exodeoxyribonuclease VII large subunit [Streptomyces sp. MnatMP-... 19300.0e+00
EGE42075.1 Exodeoxyribonuclease 7 large subunit [Streptomyces sp. ACT-1] 19300.0e+00
WP_215106889.1 exodeoxyribonuclease VII large subunit [Streptomyces sp. McG... 19290.0e+00
WP_093682725.1 MULTISPECIES: exodeoxyribonuclease VII large subunit [unclas... 19280.0e+00
WP_043391732.1 MULTISPECIES: exodeoxyribonuclease VII large subunit [unclas... 19280.0e+00
GGY29389.1 exodeoxyribonuclease 7 large subunit [Streptomyces anulatus] 19210.0e+00
WP_050360672.1 MULTISPECIES: exodeoxyribonuclease VII large subunit [Strept... 19200.0e+00
WP_057665517.1 exodeoxyribonuclease VII large subunit [Streptomyces anulatu... 19190.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear