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IDSGR_2560 TypeCDS
From3022103 nt length3246
To3025348 aa length1081
Gene pI6.25
Definitionputative regulatory protein M.W (Da)115819
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3297 putative regulatory protein12280.0e+00
coelSCO4969 putative regulatory protein13540.0e+00
samSAM23877_4785 Regulatory protein13000.0e+00
kanCP970_15760 tetratricopeptide repeat protein13720.0e+00
scabSCAB34281 13800.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TPR_121Tetratricopeptide repeat740-81273.11.5e-20

NB-ARC1NB-ARC domain243-44035.35.5e-09

AAA_161AAA ATPase domain218-34635.79.9e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012379294.1 MULTISPECIES: tetratricopeptide repeat protein [Streptomyces... 42260.0e+00
WP_030705179.1 tetratricopeptide repeat protein [Streptomyces griseus] 42120.0e+00
WP_164363811.1 tetratricopeptide repeat protein [Streptomyces griseus] >gb 42100.0e+00
WP_003966687.1 MULTISPECIES: tetratricopeptide repeat protein [unclassified... 42080.0e+00
WP_093682694.1 MULTISPECIES: tetratricopeptide repeat protein [unclassified... 42000.0e+00
WP_210933678.1 tetratricopeptide repeat protein [Streptomyces sp. 404i] >lc... 40350.0e+00
WP_210991409.1 tetratricopeptide repeat protein [Streptomyces sp. C3-3] >lc... 40290.0e+00
WP_073802301.1 MULTISPECIES: tetratricopeptide repeat protein [unclassified... 40270.0e+00
WP_007458361.1 tetratricopeptide repeat protein [Streptomyces sp. W007] >gb... 40270.0e+00
WP_050360171.1 MULTISPECIES: tetratricopeptide repeat protein [Streptomyces... 40260.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear