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IDSGR_2634 TypeCDS
From3116624 nt length609
To3116016 aa length202
Genesig25 pI5.01
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)22687
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3351 putative RNA polymerase ECF-subfamily sigma factor3092.0e-85
coelSCO4908 putative RNA polymerase sigma factor (fragment)3382.0e-94
samSAM23877_4728 RNA polymerase ECF-subfamily sigma factor3406.0e-121
kanCP970_16100 SigE family RNA polymerase sigma factor3464.0e-123
scabSCAB34791 putative RNA polymerase sigma factor3507.0e-98

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4130-18154.18.2e-15

Sigma70_r41Sigma-70, region 4134-18347.21.1e-12

Sigma70_r21Sigma-70 region 240-10344.87.2e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_218524989.1 SigE family RNA polymerase sigma factor [Streptomyces sp. MW... 9631.1e-130
WP_218786163.1 SigE family RNA polymerase sigma factor [Streptomyces sp. WY... 9621.2e-130
WP_086777920.1 SigE family RNA polymerase sigma factor [Streptomyces sp. BP... 9621.5e-130
BAG19463.1 putative RNA polymerase ECF-subfamily sigma factor [Streptomyces... 9552.3e-130
WP_003966765.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 9622.3e-130
WP_093684203.1 MULTISPECIES: SigE family RNA polymerase sigma factor [uncla... 9622.5e-130
WP_193463421.1 SigE family RNA polymerase sigma factor [Streptomyces griseu... 9613.3e-130
GHF63042.1 RNA polymerase sigma factor [Streptomyces griseus] 9544.1e-130
WP_030702599.1 SigE family RNA polymerase sigma factor [Streptomyces griseu... 9587.6e-130
WP_164616869.1 SigE family RNA polymerase sigma factor [Streptomyces sp. SI... 9588.8e-130

PSORT result

LocalizationCertaintyPSORT said
Not Clear