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IDSGR_2643 TypeCDS
From3124391 nt length954
To3123438 aa length317
Gene pI8.75
Definitionputative LysR-family transcriptional regulator M.W (Da)34370
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3360 putative LysR-family transcriptional regulator4808.0e-137
coelSCO4897 putative transcriptional regulator5077.0e-145
samSAM23877_4719 putative HTH-type transcriptional regulator YybE5110.0e+00
kanCP970_16145 LysR family transcriptional regulator5180.0e+00
scabSCAB34891 5084.0e-145
saceSACE_1031 LysR-family transcriptional regulator2094.0e-55
nfarnfa14310 putative transcriptional regulator1841.0e-47

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LysR_substrate1LysR substrate binding domain110-310167.81.8e-49

HTH_11Bacterial regulatory helix-turn-helix protein, lysR family27-8473.31e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012379347.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13810.0e+00
WP_003966774.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13730.0e+00
WP_215109438.1 LysR family transcriptional regulator [Streptomyces sp. McG3... 13570.0e+00
WP_073820404.1 LysR family transcriptional regulator [Streptomyces sp. CB02... 13560.0e+00
WP_219611873.1 LysR family transcriptional regulator [Streptomyces anulatus... 13560.0e+00
WP_164202282.1 LysR family transcriptional regulator [Streptomyces parvus] ... 13540.0e+00
WP_032794292.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13530.0e+00
WP_087765213.1 LysR family transcriptional regulator [Streptomyces sp. CS05... 13510.0e+00
WP_097866219.1 LysR family transcriptional regulator [Streptomyces sp. rh34... 13510.0e+00
WP_047178425.1 MULTISPECIES: LysR family transcriptional regulator [Strepto... 13490.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear