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IDSGR_2645 TypeCDS
From3125916 nt length717
To3126632 aa length238
Gene pI10.97
Definitionconserved hypothetical protein M.W (Da)25807
Note AseI frg.E
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4966 hypothetical protein2261.0e-60
coelSCO0736 putative secreted protein3231.0e-89
samSAM23877_6791 putative secreted protein3439.0e-122
kanCP970_17150 murein L%2CD-transpeptidase2562.0e-86
scabSCAB8341 3376.0e-94

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

YkuD1L,D-transpeptidase catalytic domain122-23154.91.1e-14

PG_binding_11Putative peptidoglycan binding domain57-9725.51e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_219205392.1 L,D-transpeptidase family protein [Streptomyces griseus] >lc... 10022.7e-136
WP_003966776.1 MULTISPECIES: L,D-transpeptidase family protein [Streptomyce... 10013.9e-136
WP_093684200.1 MULTISPECIES: L,D-transpeptidase family protein [unclassifie... 9944.1e-135
WP_075264585.1 MULTISPECIES: L,D-transpeptidase family protein [unclassifie... 9545.2e-129
WP_032783149.1 L,D-transpeptidase family protein [Streptomyces albus] 9537.5e-129
WP_032763639.1 L,D-transpeptidase family protein [Streptomyces sp. CNS654] 9537.8e-129
WP_175514408.1 L,D-transpeptidase family protein [Streptomyces sp. CAI 127]... 9538.5e-129
WP_109179879.1 L,D-transpeptidase family protein [Streptomyces sp. CS131] >... 9511.6e-128
WP_093444347.1 MULTISPECIES: L,D-transpeptidase family protein [Streptomyce... 9511.7e-128
WP_215109427.1 L,D-transpeptidase family protein [Streptomyces sp. McG3] >l... 9511.7e-128

PSORT result

LocalizationCertaintyPSORT said
Not Clear