| ID | SGR_2711
| Type | CDS
|
| From | 3204607
| nt length | 990
|
| To | 3203618
| aa length | 329
|
| Gene | mdh
| pI | 4.94
|
| Definition | putative malate dehydrogenase
| M.W (Da) | 34448
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_3436 putative malate/lactate dehydrogenase | 542 | 3.0e-155
|
| coel | SCO4827 mdh malate dehydrogenase | 592 | 2.0e-170
|
| sam | SAM23877_4639 Malate dehydrogenase | 575 | 0.0e+00
|
| kan | CP970_16700 malate dehydrogenase | 585 | 0.0e+00
|
| scab | SCAB35681 putative malate/lactate dehydrogenase | 568 | 3.0e-163
|
| sace | SACE_3674 malate dehydrogenase | 538 | 2.0e-154
|
| nfar | nfa36620 putative malate dehydrogenase | 452 | 2.0e-128
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ldh_1_C | 1 | lactate/malate dehydrogenase, alpha/beta C-terminal domain | 157-323 | 117.0 | 7.1e-34
|
| Ldh_1_N | 1 | lactate/malate dehydrogenase, NAD binding domain | 7-147 | 107.4 | 5.6e-31
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|