| ID | SGR_2748
| Type | CDS
|
| From | 3253721
| nt length | 1911
|
| To | 3251811
| aa length | 636
|
| Gene | choD
| pI | 9.35
|
| Definition | putative cholesterol oxidase
| M.W (Da) | 67455
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_5017 putative cholesterol oxidase | 902 | 0.0e+00
|
| coel | SCO4781 putative cholesterol oxidase | 938 | 0.0e+00
|
| sam | SAM23877_4595 Cholesterol oxidase | 962 | 0.0e+00
|
| kan | CP970_16960 GMC family oxidoreductase | 959 | 0.0e+00
|
| scab | SCAB36081 putative cholesterol oxidase | 924 | 0.0e+00
|
| sace | SACE_6705 cholesterol oxidase | 642 | 0.0e+00
|
| nfar | nfa26130 putative cholesterol oxidase | 648 | 0.0e+00
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GMC_oxred_C | 1 | GMC oxidoreductase | 505-562 | 54.1 | 2.1e-14
|
| GMC_oxred_N | 1 | GMC oxidoreductase | 35-314 | 40.4 | 2e-10
|
| FAD_binding_2 | 1 | FAD binding domain | 36-68 | 30.8 | 1.4e-07
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|