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IDSGR_2805 TypeCDS
From3318116 nt length855
To3317262 aa length284
GenetruA pI9.45
Definitionputative pseudouridine synthase M.W (Da)31008
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4955 putative pseudouridine synthase4245.0e-120
coelSCO4731 putative pseudouridylate synthase4448.0e-126
samSAM23877_4526 tRNA pseudouridine synthase A4239.0e-152
kanCP970_17200 tRNA pseudouridine(38-40) synthase TruA4631.0e-167
scabSCAB36651 putative pseudouridine synthase4479.0e-127
saceSACE_6801 tRNA pseudouridine synthase A2555.0e-69
nfarnfa8390 putative tRNA pseudouridine synthase2216.0e-59

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_12tRNA pseudouridine synthase18-116, 157-260103.19.2e-30

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012379458.1 MULTISPECIES: tRNA pseudouridine(38-40) synthase TruA [Strep... 13740.0e+00
WP_003966935.1 tRNA pseudouridine(38-40) synthase TruA [Streptomyces sp. AC... 13710.0e+00
WP_200719495.1 MULTISPECIES: tRNA pseudouridine(38-40) synthase TruA [uncla... 13700.0e+00
WP_030702446.1 tRNA pseudouridine(38-40) synthase TruA [Streptomyces griseu... 13670.0e+00
WP_118901880.1 tRNA pseudouridine(38-40) synthase TruA [Streptomyces globis... 13670.0e+00
WP_006126899.1 MULTISPECIES: tRNA pseudouridine(38-40) synthase TruA [Strep... 13620.0e+00
WP_075264712.1 tRNA pseudouridine(38-40) synthase TruA [Streptomyces sp. Tu... 13620.0e+00
WP_097983164.1 tRNA pseudouridine(38-40) synthase TruA [Streptomyces sp. f1... 13610.0e+00
WP_189518452.1 tRNA pseudouridine(38-40) synthase TruA [Streptomyces sinden... 13610.0e+00
WP_030628626.1 MULTISPECIES: tRNA pseudouridine(38-40) synthase TruA [Strep... 13610.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear