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IDSGR_2809 TypeCDS
From3320965 nt length381
To3320585 aa length126
GenerpsM pI11.84
Definition30S ribosomal protein S13 M.W (Da)14117
Note AseI frg.E
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4951 putative ribosomal protein S131829.0e-48
coelSCO4727 30S ribosomal protein S132198.0e-59
samSAM23877_4522 30S ribosomal subunit protein S132194.0e-76
kanCP970_17220 30S ribosomal protein S132152.0e-74
scabSCAB36691 putative ribosomal protein S132236.0e-60
saceSACE_6806 30S ribosomal protein S131691.0e-43
nfarnfa8340 putative ribosomal protein S131872.0e-49

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S131Ribosomal protein S13/S183-109109.99.7e-32

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003966938.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >sp 6391.1e-84
WP_006126897.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >gb 6363.6e-84
WP_179181799.1 MULTISPECIES: 30S ribosomal protein S13 [unclassified Strept... 6355.6e-84
WP_191045700.1 30S ribosomal protein S13 [Streptomyces sp. JV180] >lcl 6339.1e-84
WP_018490826.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >gb 6251.8e-82
WP_146481856.1 30S ribosomal protein S13 [Streptomyces qinzhouensis] >gb 6242.1e-82
WP_018510587.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomycetaceae] ... 6233.5e-82
WP_018519286.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >gb 6224.5e-82
WP_153486738.1 MULTISPECIES: 30S ribosomal protein S13 [Streptomyces] >gb 6216.5e-82
WP_190121688.1 30S ribosomal protein S13 [Streptomyces inusitatus] >dbj 6216.5e-82

PSORT result

LocalizationCertaintyPSORT said
Not Clear