| ID | SGR_2829
| Type | CDS
|
| From | 3331595
| nt length | 372
|
| To | 3331224
| aa length | 123
|
| Gene | rplV
| pI | 10.62
|
| Definition | 50S ribosomal protein L22
| M.W (Da) | 13448
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_4931 putative ribosomal protein L22 | 184 | 2.0e-48
|
| coel | SCO4707 50S ribosomal protein L22 | 242 | 1.0e-65
|
| sam | SAM23877_4503 50S ribosomal subunit protein L22 | 228 | 7.0e-80
|
| kan | CP970_17335 50S ribosomal protein L22 | 231 | 8.0e-81
|
| scab | SCAB36891 putative ribosomal protein L22 | 231 | 1.0e-62
|
| sace | SACE_6831 50S ribosomal protein L22 | 151 | 2.0e-38
|
| nfar | nfa7380 putative ribosomal protein L22 | 127 | 2.0e-31
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Ribosomal_L22 | 1 | Ribosomal protein L22p/L17e | 16-116 | 116.8 | 4.7e-34
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| RLV68892.1 | 50S ribosomal protein L22 [Streptomyces sp. CBMAI 2042]
| 636 | 3.4e-84 |
| ALC21492.1 | 50S ribosomal protein L22 [Streptomyces pristinaespiralis] >gb
| 634 | 4.9e-84 |
| GGU68381.1... |
| 631 | 1.8e-83 |
| GGT32203.1 | 50S ribosomal protein L22 [Streptomyces purpureus]
| 630 | 2.4e-83 |
| RII22283.1 | 50S ribosomal protein L22 [Streptomyces sp. YIM 130001]
| 628 | 4.1e-83 |
| GGJ94133.1 | 50S ribosomal protein L22 [Streptomyces camponoticapitis]
| 628 | 4.5e-83 |
| PKV87280.1 | LSU ribosomal protein L22P [Streptomyces sp. TLI_146]
| 627 | 7.3e-83 |
| ALM41020.1 | 50S ribosomal protein L22 [Streptomyces sp. FR-008] >gb
| 627 | 7.6e-83 |
| AIA04310.1 | 50S ribosomal protein L22 [Streptomyces albulus] >gb
| 625 | 1.5e-82 |
| GBQ02132.1 | 50S ribosomal protein L22 [Streptomyces spongiicola]
| 623 | 2.3e-82 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|