SGR_2831

ID SGR_2831 Type CDS
From 3332745 nt length 837
To 3331909 aa length 278
Gene rplB pI 11.82
Definition 50S ribosomal protein L2 M.W (Da) 30259
Note AseI frg. E
SignalP v.4.0 Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*	Reciprocally best hit to	Score	E-value
avm	SAVERM_4929 putative ribosomal protein L2	445	3.0e-126
coel	SCO4705 50S ribosomal protein L2	518	2.0e-148
sam	SAM23877_4501 50S ribosomal subunit protein L2	516	0.0e+00
kan	CP970_17345 50S ribosomal protein L2	508	0.0e+00
scab	SCAB36911 putative ribosomal protein L2	514	6.0e-147
sace	SACE_6833 50S ribosomal protein L2	428	3.0e-121
nfar	nfa7360 putative ribosomal protein L2	445	2.0e-126

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result

Model No. Description Position (aa) Score E-value

Ribosomal_L2_C 1 Ribosomal Proteins L2, C-terminal domain 126-251 187.5 8.3e-56

Ribosomal_L2 1 Ribosomal Proteins L2, RNA binding domain 42-118 109.6 4.7e-32

BLAST search result (top 10 hits)

ID Description Score E-value
WP_003966957.1 MULTISPECIES: 50S ribosomal protein L2 [Streptomycetaceae] >... 1443 0.0e+00
WP_073740402.1 MULTISPECIES: 50S ribosomal protein L2 [Streptomyces] >gb 1442 0.0e+00
WP_006126887.1 MULTISPECIES: 50S ribosomal protein L2 [Streptomyces] >gb 1440 0.0e+00
WP_124269609.1 50S ribosomal protein L2 [Streptomyces sp. ADI96-02] >gb 1440 0.0e+00
WP_093540762.1 MULTISPECIES: 50S ribosomal protein L2 [unclassified Strepto... 1439 0.0e+00
WP_030112812.1 MULTISPECIES: 50S ribosomal protein L2 [Streptomyces] >gb 1439 0.0e+00
WP_030798881.1 MULTISPECIES: 50S ribosomal protein L2 [Streptomyces] >gb 1439 0.0e+00
WP_056796589.1 MULTISPECIES: 50S ribosomal protein L2 [Streptomyces] >gb 1438 0.0e+00
WP_072485540.1 MULTISPECIES: 50S ribosomal protein L2 [Streptomyces] >lcl 1437 0.0e+00
WP_031096363.1 MULTISPECIES: 50S ribosomal protein L2 [Streptomyces] >gb 1437 0.0e+00

PSORT result

Localization Certainty PSORT said
Not Clear

ID	SGR_2831	Type	CDS
From	3332745	nt length	837
To	3331909	aa length	278
Gene	rplB	pI	11.82
Definition	50S ribosomal protein L2	M.W (Da)	30259
Note		AseI frg.	E
SignalP v.4.0	Non-secretory protein \| plot	Category

Model	No.	Description	Position (aa)	Score	E-value
Ribosomal_L2_C	1	Ribosomal Proteins L2, C-terminal domain	126-251	187.5	8.3e-56
Ribosomal_L2	1	Ribosomal Proteins L2, RNA binding domain	42-118	109.6	4.7e-32