| ID | SGR_2843
| Type | CDS
|
| From | 3347191
| nt length | 1194
|
| To | 3345998
| aa length | 397
|
| Gene | tufA1
| pI | 4.79
|
| Definition | elongation factor TU-1
| M.W (Da) | 43595
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_4920 putative elongation factor EF-Tu | 702 | 0.0e+00
|
| coel | SCO4662 tuf1 elongation factor TU-1 | 737 | 0.0e+00
|
| sam | SAM23877_4481 protein chain elongation factor EF-Tu%2C possible GTP-binding factor (duplicate of tufA) | 736 | 0.0e+00
|
| kan | CP970_17370 elongation factor Tu | 759 | 0.0e+00
|
| scab | SCAB37091 putative elongation factor EF-Tu | 753 | 0.0e+00
|
| sace | SACE_6838 elongation factor EF1A | 692 | 0.0e+00
|
| nfar | nfa50750 putative translation elongation factor TU | 686 | 0.0e+00
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| GTP_EFTU | 1 | Elongation factor Tu GTP binding domain | 10-203 | 199.9 | 2.6e-59
|
| GTP_EFTU_D3 | 1 | Elongation factor Tu C-terminal domain | 301-395 | 113.5 | 5.5e-33
|
| GTP_EFTU_D2 | 1 | Elongation factor Tu domain 2 | 227-296 | 63.8 | 1.3e-17
|
| MMR_HSR1 | 1 | 50S ribosome-binding GTPase | 15-138 | 25.4 | 1.1e-05
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|