| ID | SGR_2962
| Type | CDS
|
| From | 3458317
| nt length | 1065
|
| To | 3457253
| aa length | 354
|
| Gene |
| pI | 5.51
|
| Definition | putative ABC transporter ATP-binding protein
| M.W (Da) | 36271
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Signal peptide | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_4867 putative ABC transporter ATP-binding protein | 401 | 7.0e-113
|
| coel | SCO4585 putative ABC transporter ATP-binding protein | 463 | 1.0e-131
|
| sam | SAM23877_4420 putative ABC transporter ATP-binding protein | 448 | 8.0e-160
|
| kan | CP970_17775 ABC transporter ATP-binding protein | 437 | 3.0e-155
|
| scab | SCAB37801 putative ABC transporter ATP-binding protein | 453 | 1.0e-128
|
| sace | SACE_0995 putative ABC transporter ATP-binding protein | 273 | 3.0e-74
|
| nfar | nfa4200 putative ABC transporter ATP-binding protein | 214 | 7.0e-57
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| ABC_tran | 1 | ABC transporter | 64-208 | 82.7 | 3e-23
|
| AAA_21 | 1 | AAA domain, putative AbiEii toxin, Type IV TA system | 181-237 | 55.7 | 6e-15
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| WP_012379549.1 | MULTISPECIES: ABC transporter ATP-binding protein [Streptomy...
| 1171 | 3.1e-158 |
| NEB5... |
| 1162 | 1.2e-157 |
| WP_030702300.1 | ABC transporter ATP-binding protein [Streptomyces griseus]
| 1166 | 1.5e-157 |
| SCE50461.1 | ABC-2 type transport system ATP-binding protein, partial [Strept...
| 1165 | 2.2e-157 |
| WP_003967062.1 | MULTISPECIES: ABC transporter ATP-binding protein [unclassif...
| 1164 | 2.6e-157 |
| WP_078574042.1 | MULTISPECIES: ABC transporter ATP-binding protein [unclassif...
| 1158 | 4.9e-157 |
| WP_215111858.1 | ATP-binding cassette domain-containing protein [Streptomyces...
| 1102 | 1.7e-148 |
| EHM28280.1 | putative ABC transporter ATP-binding protein [Streptomyces sp. W0...
| 1076 | 1.1e-143 |
| WP_078496303.1 | MULTISPECIES: ABC transporter ATP-binding protein [unclassif...
| 1068 | 2.9e-143 |
| WP_164221622.1 | ABC transporter ATP-binding protein [Streptomyces anulatus] ...
| 1069 | 2.9e-143 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|