| ID | SGR_2970
| Type | CDS
|
| From | 3469442
| nt length | 2052
|
| To | 3467391
| aa length | 683
|
| Gene | recQ
| pI | 5.36
|
| Definition | putative ATP-dependent DNA helicase
| M.W (Da) | 73457
|
| Note |
| AseI frg. | E
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_4851 putative ATP-dependent DNA helicase | 967 | 0.0e+00
|
| coel | SCO4577 putative helicase | 1020 | 0.0e+00
|
| sam | SAM23877_4398 ATP-dependent DNA helicase RecQ | 1004 | 0.0e+00
|
| kan | CP970_17820 DNA helicase RecQ | 1043 | 0.0e+00
|
| scab | SCAB37941 putative ATP-dependent DNA helicase | 997 | 0.0e+00
|
| sace | SACE_3331 ATP-dependent DNA helicase | 895 | 0.0e+00
|
| nfar | nfa44830 putative helicase | 888 | 0.0e+00
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| RQC | 1 | RQC domain | 417-531 | 118.2 | 1.3e-34
|
| HRDC | 1 | HRDC domain | 561-625 | 71.0 | 5.5e-20
|
| RecQ_Zn_bind | 1 | RecQ zinc-binding | 352-415 | 68.4 | 5.9e-19
|
| Helicase_C | 1 | Helicase conserved C-terminal domain | 234-339 | 66.3 | 2.5e-18
|
| DEAD | 1 | DEAD/DEAH box helicase | 38-195 | 55.8 | 4.2e-15
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|