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IDSGR_313 TypeCDS
From343213 nt length1605
To344817 aa length534
Gene pI6.65
Definitionputative RNA polymerase ECF-subfamily sigma factor M.W (Da)56171
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
kanCP970_41670 sigma-70 family RNA polymerase sigma factor2047.0e-60
saceSACE_3129 transmembrane protein1251.0e-29

*kan, Streptomyces kanamyceticus ATCC 12853; sace, Saccharopolyspora erythraea NRRL2338;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CAP1Cysteine-rich secretory protein family417-53184.31.1e-23

Sigma70_r21Sigma-70 region 224-9159.61.7e-16

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_164360562.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 11411.6e-151
WP_219204666.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 11463.1e-151
WP_093562898.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 11527.6e-150
WP_012377695.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 11527.8e-150
WP_161185855.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 11173.3e-149
WP_003964180.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 11473.5e-149
WP_143669303.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 11192.4e-148
WP_143662910.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 11194.0e-148
WP_143666870.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 11156.8e-148
WP_143672516.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 11141.0e-147

PSORT result

LocalizationCertaintyPSORT said
Not Clear