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IDSGR_3279 TypeCDS
From3844262 nt length3003
To3841260 aa length1000
Gene pI6.22
Definitionputative AfsR-like transcriptional regulator M.W (Da)109197
Note AseI frg.K
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO3217 putative transcriptional regulator4134.0e-116
kanCP970_10830 SARP family transcriptional regulator5500.0e+00
scabSCAB61901 putative AfsR-like transcriptional regulator4275.0e-120

*coel, Streptomyces coelicolor A3(2); kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

BTAD1Bacterial transcriptional activator domain102-246149.86.2e-44

NB-ARC1NB-ARC domain288-53839.04.1e-10

Trans_reg_C1Transcriptional regulatory protein, C terminal25-9331.61.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012379775.1 winged helix-turn-helix domain-containing protein [Streptomy... 41240.0e+00
NEB57502.1 AfsR family transcriptional regulator [Streptomyces griseus] 41220.0e+00
WP_093563404.1 winged helix-turn-helix domain-containing protein [Streptomy... 41180.0e+00
WP_093683262.1 winged helix-turn-helix domain-containing protein [Streptomy... 41140.0e+00
MYR14745.1 AfsR family transcriptional regulator [Streptomyces sp. SID724] 41130.0e+00
WP_003967400.1 MULTISPECIES: winged helix-turn-helix domain-containing prot... 41120.0e+00
WP_202549635.1 winged helix-turn-helix domain-containing protein [Streptomy... 40810.0e+00
WP_203639335.1 winged helix-turn-helix domain-containing protein [Streptomy... 40750.0e+00
WP_202463636.1 winged helix-turn-helix domain-containing protein [Streptomy... 40690.0e+00
WP_202465403.1 winged helix-turn-helix domain-containing protein [Streptomy... 40670.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear