| ID | SGR_3340
| Type | CDS
|
| From | 3922679
| nt length | 402
|
| To | 3922278
| aa length | 133
|
| Gene | wblA
| pI | 4.55
|
| Definition | putative WhiB-family transcriptional regulator
| M.W (Da) | 14553
|
| Note |
| AseI frg. | K
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_4584 putative WhiB-family transcriptional regulator; putative role in cell cycle control | 202 | 8.0e-54
|
| coel | SCO3579 putative regulatory protein | 184 | 5.0e-48
|
| sam | SAM23877_4083 Transcriptional regulator WhiB | 182 | 1.0e-61
|
| kan | CP970_19750 WhiB family transcriptional regulator | 225 | 4.0e-78
|
| scab | SCAB41391 putative WhiB-family transcriptional regulator; putative role in cell cycle control | 183 | 6.0e-48
|
| nfar | nfa3400 putative transcriptional regulator | 115 | 1.0e-27
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| Whib | 1 | Transcription factor WhiB | 24-86 | 87.0 | 8.6e-25
|
BLAST search result (top 10 hits)
| ID | Description | Score | E-value
|
| ... |
| 622 | 7.7e-82 |
| AWL87050.1 | WhiB family transcriptional regulator [Streptomyces globisporus] ...
| 621 | 9.5e-82 |
| ARF62580.1 | hypothetical protein B1H20_15105 [Streptomyces violaceoruber] >gb...
| 617 | 4.3e-81 |
| NEB40833.1 | WhiB family transcriptional regulator [Streptomyces sp. SID14515]...
| 615 | 8.5e-81 |
|
| 614 | 1.5e-80 |
| ARF73436.1 | hypothetical protein B7C62_15060 [Kitasatospora albolonga] >gb
| 612 | 3.1e-80 |
| OSC... |
| 611 | 3.3e-80 |
| MXG27129.1 | WhiB family transcriptional regulator [Streptomyces sp. YIM 13258...
| 608 | 1.3e-79 |
| NED12754.1 | WhiB family transcriptional regulator [Streptomyces sp. SID9124] ...
| 605 | 3.2e-79 |
| ATY96529.1 | WhiB family transcriptional regulator [Streptomyces cavourensis] ...
| 605 | 3.3e-79 |
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|