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IDSGR_347 TypeCDS
From373187 nt length3021
To376207 aa length1006
GenehelZ1 pI5.85
Definitionputative SNF2/RAD54 family helicase M.W (Da)107265
Note AseI frg.F
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1592 putative SNF2/RAD54 family helicase12140.0e+00
coelSCO1167 putative helicase12510.0e+00
samSAM23877_1253 putative helicase13030.0e+00
kanCP970_40015 DEAD/DEAH box helicase13660.0e+00
scabSCAB79891 putative SNF2/RAD54 family helicase12680.0e+00
saceSACE_3090 SNF2/RAD54 family helicase5051.0e-143
nfarnfa10310 putative helicase4795.0e-136

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SNF2_N1SNF2 family N-terminal domain559-817172.31e-50

DUF36701SNF2 Helicase protein341-493148.87.2e-44

Helicase_C1Helicase conserved C-terminal domain834-94565.74.1e-18

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012377719.1 DEAD/DEAH box helicase [Streptomyces griseus] >lcl 45020.0e+00
SED79444.1 Superfamily II DNA or RNA helicase, SNF2 family [Streptomyces gr... 44990.0e+00
WP_202549382.1 DEAD/DEAH box helicase [Streptomyces sp. SID7816] 44960.0e+00
NEB52961.1 DEAD/DEAH box helicase [Streptomyces griseus] 44000.0e+00
WP_043391158.1 DEAD/DEAH box helicase [Streptomyces sp. ACT-1] >gb 43990.0e+00
WP_203638286.1 DEAD/DEAH box helicase [Streptomyces griseus] 43970.0e+00
WP_202476215.1 DEAD/DEAH box helicase [Streptomyces sp. SID4928] 43930.0e+00
EGE39841.1 SNF2-related protein [Streptomyces sp. ACT-1] 43930.0e+00
WP_093683850.1 DEAD/DEAH box helicase [Streptomyces sp. MnatMP-M77] >gb 43920.0e+00
WP_202464345.1 DEAD/DEAH box helicase [Streptomyces sp. SID8364] 43870.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear