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IDSGR_3499 TypeCDS
From4098063 nt length396
To4098458 aa length131
Gene pI6.81
Definitionputative substrate-binding protein M.W (Da)13736
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2340 putative substrate-binding protein1921.0e-50
coelSCO3703 putative substrate binding protein2291.0e-61
samSAM23877_1431 putative substrate-binding protein2261.0e-78
kanCP970_29905 helix-turn-helix domain-containing protein2377.0e-83
scabSCAB38751 2243.0e-60
saceSACE_0570 probable ABC molybdate transporter, substrate binding protein1091.0e-25
nfarnfa43270 putative transporter1037.0e-24

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TOBE1TOBE domain66-12866.51.7e-18

HTH_171Helix-turn-helix domain4-4937.61.6e-09

MerR1MerR family regulatory protein5-4037.11.8e-09

MerR_11MerR HTH family regulatory protein4-4025.78.4e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
GGY32165.1 MerR family transcriptional regulator [Streptomyces anulatus] 6626.9e-88
WP_003967638.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 6609.7e-88
WP_219611213.1 TOBE domain-containing protein [Streptomyces anulatus] >gb 6563.9e-87
WP_164218925.1 helix-turn-helix transcriptional regulator [Streptomyces anu... 6563.9e-87
WP_097910046.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 6556.1e-87
WP_210936798.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 6556.2e-87
WP_073867117.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 6541.0e-86
WP_164614388.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6531.4e-86
EHM28077.1 MerR family transcriptional regulator [Streptomyces sp. W007] 6522.3e-86
WP_032792160.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6512.8e-86

PSORT result

LocalizationCertaintyPSORT said
Not Clear