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IDSGR_3511 TypeCDS
From4112029 nt length1566
To4110464 aa length521
Gene pI11.42
Definitionputative ATP-dependent RNA helicase M.W (Da)54869
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7054 putative ATP-dependent RNA helicase6470.0e+00
coelSCO5920 undefined product7470.0e+00
samSAM23877_7553 putative DEAD-box RNA helicase7120.0e+00
scabSCAB87601 putative ATP-dependent RNA helicase7280.0e+00
nfarnfa25160 putative RNA helicase4318.0e-122

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; scab, Streptomyces scabies 87.22; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase102-269147.14e-43

Helicase_C1Helicase conserved C-terminal domain311-41290.77e-26

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_164361197.1 DEAD/DEAH box helicase, partial [Streptomyces griseus] >gb 19840.0e+00
WP_012379948.1 MULTISPECIES: DEAD/DEAH box helicase [Streptomyces] >lcl 19830.0e+00
WP_003967652.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 19790.0e+00
WP_030701241.1 DEAD/DEAH box helicase [Streptomyces griseus] 19760.0e+00
WP_161184994.1 DEAD/DEAH box helicase, partial [Streptomyces sp. SID724] >g... 19710.0e+00
WP_098022009.1 DEAD/DEAH box helicase [Streptomyces sp. wa1071] 19600.0e+00
WP_093685077.1 MULTISPECIES: DEAD/DEAH box helicase [unclassified Streptomy... 19590.0e+00
WP_097962570.1 DEAD/DEAH box helicase [Streptomyces sp. or20] 19510.0e+00
WP_215106418.1 DEAD/DEAH box helicase [Streptomyces sp. McG3] >lcl 19510.0e+00
WP_097924877.1 DEAD/DEAH box helicase, partial [Streptomyces sp. wa1063] 19500.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear