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IDSGR_3512 TypeCDS
From4112478 nt length204
To4112275 aa length67
GenecspD1 pI4.54
Definitionputative cold shock protein M.W (Da)7109
Note AseI frg.J
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_893 putative cold shock protein1129.0e-27

*avm, Streptomyces avermitilis;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-66106.93e-31

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003967653.1 MULTISPECIES: cold-shock protein [Streptomycetaceae] >gb 3468.7e-42
WP_018522223.1 MULTISPECIES: cold-shock protein [unclassified Streptomyces]... 3432.1e-41
WP_015609674.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3432.8e-41
WP_019764411.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3423.2e-41
WP_185029111.1 cold-shock protein [Streptomyces candidus] >lcl 3423.3e-41
WP_030701243.1 cold-shock protein [Streptomyces griseus] 3415.0e-41
WP_033269772.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3415.3e-41
WP_164640014.1 cold-shock protein [Streptomyces sp. SID9124] >gb 3406.3e-41
WP_073727988.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3406.8e-41
WP_124268980.1 cold-shock protein [Streptomyces sp. ADI96-02] >gb 3407.4e-41

PSORT result

LocalizationCertaintyPSORT said
Not Clear