| ID | SGR_3630
| Type | CDS
|
| From | 4243106
| nt length | 1278
|
| To | 4244383
| aa length | 425
|
| Gene | serS1
| pI | 4.84
|
| Definition | putative seryl-tRNA synthase
| M.W (Da) | 46861
|
| Note |
| AseI frg. | M
|
| SignalP v.4.0 | Non-secretory protein | plot
| Category |
|
Orthologs (if any)
| Bacteria* | Reciprocally best hit to | Score | E-value
|
| avm | SAVERM_4244 putative seryl-tRNA synthetase | 772 | 0.0e+00
|
| coel | SCO3961 seryl-tRNA synthase | 701 | 0.0e+00
|
| sam | SAM23877_3704 Serine--tRNA ligase | 707 | 0.0e+00
|
| kan | CP970_21835 serine--tRNA ligase | 788 | 0.0e+00
|
| scab | SCAB46561 putative seryl-tRNA synthetase | 715 | 0.0e+00
|
| sace | SACE_0158 seryl-tRNA synthetase | 480 | 1.0e-136
|
| nfar | nfa1400 putative seryl-tRNA synthase | 482 | 3.0e-137
|
*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;
Pfam search result
| Model | No. | Description | Position (aa) | Score | E-value
|
| tRNA-synt_2b | 1 | tRNA synthetase class II core domain (G, H, P, S and T) | 221-397 | 103.5 | 1.1e-29
|
| Seryl_tRNA_N | 1 | Seryl-tRNA synthetase N-terminal domain | 1-106 | 84.2 | 6e-24
|
BLAST search result (top 10 hits)
PSORT result
| Localization | Certainty | PSORT said
|
| Not Clear | |
|