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IDSGR_3643 TypeCDS
From4258506 nt length1707
To4256800 aa length568
Gene pI5.07
Definitionputative two-component system sensor kinase M.W (Da)60289
Note AseI frg.M
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4257 putative two-component system sensor kinase7260.0e+00
coelSCO3948 putative two component sensor7690.0e+00
samSAM23877_3716 Hypoxia sensor histidine kinase response regulator DosT7630.0e+00
kanCP970_21750 GAF domain-containing protein8530.0e+00
scabSCAB10621 3773.0e-105
saceSACE_0145 two-component system sensor kinase1596.0e-40
nfarnfa28940 putative two-component system sensor kinase2964.0e-81

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sam, Streptomyces ambofaciens ATCC 23877; kan, Streptomyces kanamyceticus ATCC 12853; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF_22GAF domain46-185, 216-349125.91.2e-36

GAF2GAF domain46-185, 216-349103.31.2e-29

GAF_31GAF domain217-34957.31.7e-15

HisKA_31Histidine kinase367-42843.72.6e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_012380054.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 27920.0e+00
WP_164360808.1 GAF domain-containing protein [Streptomyces griseus] >gb 27910.0e+00
WP_161185255.1 GAF domain-containing protein [Streptomyces sp. SID724] >gb 27890.0e+00
WP_093685136.1 MULTISPECIES: GAF domain-containing protein [unclassified St... 27840.0e+00
WP_003967828.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 27820.0e+00
WP_093563793.1 GAF domain-containing protein [Streptomyces sp. OspMP-M43] >... 27760.0e+00
WP_030576107.1 GAF domain-containing protein [Streptomyces anulatus] 27000.0e+00
WP_124264266.1 GAF domain-containing protein [Streptomyces sp. ADI98-10] >g... 26970.0e+00
WP_073867218.1 MULTISPECIES: GAF domain-containing protein [unclassified St... 26950.0e+00
WP_073799863.1 MULTISPECIES: GAF domain-containing protein [unclassified St... 26930.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear